3PSH

Classification of a Haemophilus influenzae ABC transporter HI1470/71 through its cognate molybdate periplasmic binding protein MolA (MolA bound to Molybdate)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP4.527724% PEG2000 MME, 0.1 M sodium acetate pH 4.5, 0.2 M ammonium sulfate, 12% glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
6.1780.06

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 123.295α = 90
b = 123.295β = 90
c = 103.037γ = 120
Symmetry
Space GroupP 31 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 325 mm CCD2007-12-07MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRL BEAMLINE BL12-21.54, 1.00SSRLBL12-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.52096.05144042138477

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.519.941384751380296.140.29760.29540.3167RANDOM18.1549
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.010.01-0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.907
r_dihedral_angle_4_deg15.819
r_dihedral_angle_3_deg12.848
r_dihedral_angle_1_deg5.893
r_scangle_it4.886
r_scbond_it3.534
r_angle_refined_deg2.384
r_mcangle_it2.195
r_mcbond_it1.531
r_chiral_restr0.174
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.907
r_dihedral_angle_4_deg15.819
r_dihedral_angle_3_deg12.848
r_dihedral_angle_1_deg5.893
r_scangle_it4.886
r_scbond_it3.534
r_angle_refined_deg2.384
r_mcangle_it2.195
r_mcbond_it1.531
r_chiral_restr0.174
r_bond_refined_d0.031
r_gen_planes_refined0.015
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2578
Nucleic Acid Atoms
Solvent Atoms217
Heterogen Atoms5

Software

Software
Software NamePurpose
SHELXphasing
REFMACrefinement
PDB_EXTRACTdata extraction
ADSCdata collection
MOSFLMdata reduction
SCALAdata scaling
SHELXDphasing