3PR7

Multi-functional and mechanosensitive receptor binding activity of the Moraxella catarrhalis adhesin UspA1


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.52910.1 M MES, 0.2 M sodium dihydrogen phosphate, 0.2 M potassium dihydrogen phosphate, 1 M sodium chloride, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
3.8167.73

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 118.219α = 90
b = 118.219β = 90
c = 176.57γ = 120
Symmetry
Space GroupP 63

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayCCDADSC QUANTUM 315r2010-09-29MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I020.9795DiamondI02

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.93102.3899.90.11616.312.32991429914

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.9429.622991429696150399.850.20330.20260.2162RANDOM63.741
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
5.382.695.38-8.07
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.734
r_dihedral_angle_4_deg17.732
r_dihedral_angle_3_deg14.978
r_dihedral_angle_1_deg5.604
r_scangle_it3.796
r_scbond_it1.95
r_mcangle_it1.07
r_angle_refined_deg1.04
r_mcbond_it0.501
r_chiral_restr0.072
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.734
r_dihedral_angle_4_deg17.732
r_dihedral_angle_3_deg14.978
r_dihedral_angle_1_deg5.604
r_scangle_it3.796
r_scbond_it1.95
r_mcangle_it1.07
r_angle_refined_deg1.04
r_mcbond_it0.501
r_chiral_restr0.072
r_bond_refined_d0.008
r_gen_planes_refined0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6117
Nucleic Acid Atoms
Solvent Atoms45
Heterogen Atoms

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction