X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP82940.2M sodium/potassium tartrate, 15% PEG 3350, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 294K
Crystal Properties
Matthews coefficientSolvent content
2.856.06

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 80.493α = 90
b = 64.076β = 95.23
c = 81.597γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayCCDADSC QUANTUM 2102008-04-02MMAD
21x-rayCCDADSC QUANTUM 2102007-10-15MMAD
31x-rayCCDADSC QUANTUM 2102008-03-16MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPAL/PLS BEAMLINE 4A0.97950, 0.97956, 0.97171PAL/PLS4A
2SYNCHROTRONPAL/PLS BEAMLINE 6B0.97950, 0.97956, 0.97171PAL/PLS6B
3SYNCHROTRONPAL/PLS BEAMLINE 6C10.97950, 0.97956, 0.97171PAL/PLS6C1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,2,32.541.510024411
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1,2,32.52.5651001214

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.5412441113001000.217680.216470.24012RANDOM26.414
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.25-0.08-0.820.55
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.707
r_dihedral_angle_4_deg19.97
r_dihedral_angle_3_deg17.204
r_dihedral_angle_1_deg4.134
r_scangle_it0.893
r_angle_refined_deg0.822
r_scbond_it0.528
r_mcangle_it0.359
r_mcbond_it0.183
r_chiral_restr0.05
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.707
r_dihedral_angle_4_deg19.97
r_dihedral_angle_3_deg17.204
r_dihedral_angle_1_deg4.134
r_scangle_it0.893
r_angle_refined_deg0.822
r_scbond_it0.528
r_mcangle_it0.359
r_mcbond_it0.183
r_chiral_restr0.05
r_bond_refined_d0.004
r_gen_planes_refined0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3997
Nucleic Acid Atoms
Solvent Atoms48
Heterogen Atoms

Software

Software
Software NamePurpose
ADSCdata collection
SOLVEphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling