X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP4.52930.2M sodium thiocyanate, 20% PEG 3350, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 114.6α = 90
b = 33.75β = 107.78
c = 122.37γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDRAYONIX MX225HE2011-02-16MSINGLE WAVELENGTH
22x-ray100CCDRAYONIX MX225HE2011-02-16MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSPRING-8 BEAMLINE BL44XU0.9SPring-8BL44XU
2SYNCHROTRONSPRING-8 BEAMLINE BL44XU0.9791, 0.97936, 0.99508, 0.96413SPring-8BL44XU

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.5547.761491014910
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.552.69100

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.5529.751413575799.150.242280.241220.26195RANDOM74.506
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.08-0.110.78-0.77
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.4
r_dihedral_angle_3_deg21.735
r_dihedral_angle_4_deg15.714
r_dihedral_angle_1_deg6.544
r_scangle_it4.502
r_scbond_it2.481
r_mcangle_it1.957
r_angle_refined_deg1.844
r_mcbond_it1.049
r_chiral_restr0.116
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.4
r_dihedral_angle_3_deg21.735
r_dihedral_angle_4_deg15.714
r_dihedral_angle_1_deg6.544
r_scangle_it4.502
r_scbond_it2.481
r_mcangle_it1.957
r_angle_refined_deg1.844
r_mcbond_it1.049
r_chiral_restr0.116
r_bond_refined_d0.019
r_gen_planes_refined0.009
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2707
Nucleic Acid Atoms
Solvent Atoms48
Heterogen Atoms

Software

Software
Software NamePurpose
HKL-2000data collection
SHELXCDphasing
SHELXEmodel building
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling