2X8N

Solution NMR structure of uncharacterized protein CV0863 from Chromobacterium violaceum. NORTHEAST STRUCTURAL GENOMICS TARGET (NESG) target CvT3. OCSP target CV0863.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
113C-NOESY-HSQC-ALIPHATIC90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
213C-HSQC-CT-ALIPHATIC90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
313C-HSQC-ALIPHATIC90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
413C-HSQC-AROMATIC90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
515N-HSQ90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
613C-NOESY-HSQC-AROMATIC90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
715N-NOESY-HSQC90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
8H(C)CH-TOCSY- ALIPHATIC90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
9(H)CCH-TOCSY- ALIPHATIC90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
10H(C)CH-TOCSY-AROMATIC90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
11(H)CCH-TOCSY-AROMATIC90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
12T190% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
13T1RHO90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
14HNCO90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
15HNCA90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
16CBCA(CO)NH90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
17HBHA(CBCACO)NH90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
18H(CCCO)NH-TOCSY90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
1913C-HSQC-CT-ALIPHATIC90% H2O/10% D2O, 10MM TRIS,300 MM NACL,10 MM ZNSO4,10 MM DTT, 1 MM BENZAMIDINE,0.01% NAN3,1X ROCHE INHIBITOR COCKTAIL, 100% 13C, 100% 15N-CV0863 1MM300 mM7.01.0 atm298.0
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2BrukerAVANCE600
3BrukerAVANCE500
NMR Refinement
MethodDetailsSoftware
TORSION ANGLE DYNAMICS, RESTRAINED MOLECULAR DYNAMICSRESTRAINED MOLECULAR DYNAMICSCNS
NMR Ensemble Information
Conformer Selection CriteriaLOWEST ENERGY
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (n/a)
Additional NMR Experimental Information
DetailsALL 3D NMR SPECTRA WERE COLLECTED WITH NON-UNIFORM SAMPLING (WWW.NMR2.BUFFALO.EDU/NESG.WIKI/SETTING_UP_NON- UNIFORMLY_SAMPLED_SPECTRA) AND PROCESSED WITH MDDGUI AND MDDNMR SOFTWARE (WWW.NMR2.BUFFALO.EDU/NESG.WIKI/ PROCESSING_ NON-UNIFORMLY_SAMPLED_SPECTRA_WITH_MULTIDIMENSIONAL_ DECOMPOSITION
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBRUNGER, ADAMS,CLORE,GROS,NILGES,READ
2structure solutionNMRPipe
3structure solutionMddNMR
4structure solutionMDDGUI
5structure solutionABACUS
6structure solutionCcpNmr AnalysisANAYSIS
7structure solutionCYANA
8structure solutionCNS