2UVZ

Structure of PKA-PKB chimera complexed with C-Phenyl-C-(4-(9H-purin-6- yl)-phenyl)-methylamine


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.3747.78

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 72.577α = 90
b = 74.661β = 90
c = 80.268γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODE

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.9427.396.80.066.62.430508
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.941.9788.50.32.41.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.9427.33305081633970.2050.2030.245RANDOM22.73
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.190.87-0.68
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.956
r_dihedral_angle_4_deg15.001
r_dihedral_angle_3_deg13.577
r_dihedral_angle_1_deg5.027
r_angle_refined_deg0.975
r_angle_other_deg0.775
r_symmetry_vdw_other0.307
r_nbd_refined0.189
r_nbd_other0.183
r_nbtor_refined0.181
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.956
r_dihedral_angle_4_deg15.001
r_dihedral_angle_3_deg13.577
r_dihedral_angle_1_deg5.027
r_angle_refined_deg0.975
r_angle_other_deg0.775
r_symmetry_vdw_other0.307
r_nbd_refined0.189
r_nbd_other0.183
r_nbtor_refined0.181
r_symmetry_hbond_refined0.117
r_xyhbond_nbd_refined0.101
r_nbtor_other0.082
r_scangle_it0.078
r_mcangle_it0.062
r_chiral_restr0.058
r_scbond_it0.056
r_symmetry_vdw_refined0.047
r_mcbond_it0.043
r_bond_refined_d0.007
r_gen_planes_refined0.003
r_bond_other_d0.001
r_gen_planes_other0.001
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2945
Nucleic Acid Atoms
Solvent Atoms304
Heterogen Atoms23

Software

Software
Software NamePurpose
REFMACrefinement