X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP5.52890.2 Magnesium chloride, 0.1 M Bis-Tris buffer, 25% PEG 3350, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties
Matthews coefficientSolvent content
2.1743.39

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 103.579α = 90
b = 59.558β = 110.32
c = 59.706γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152007-02-12MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID0.97920APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.4131.6594.60.08725.96.8621146211420.4
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.411.4461.10.4751.923.82641

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.4131.655897758977312894.60.16960.16960.16780.2031RANDOM17.165
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.97-0.830.040.35
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.989
r_dihedral_angle_4_deg17.832
r_dihedral_angle_3_deg14.52
r_sphericity_free7.191
r_scangle_it4.984
r_dihedral_angle_1_deg4.854
r_sphericity_bonded4.547
r_scbond_it3.564
r_mcangle_it2.365
r_rigid_bond_restr2.137
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.989
r_dihedral_angle_4_deg17.832
r_dihedral_angle_3_deg14.52
r_sphericity_free7.191
r_scangle_it4.984
r_dihedral_angle_1_deg4.854
r_sphericity_bonded4.547
r_scbond_it3.564
r_mcangle_it2.365
r_rigid_bond_restr2.137
r_mcbond_it1.694
r_angle_refined_deg1.642
r_nbtor_refined0.321
r_nbd_refined0.23
r_xyhbond_nbd_refined0.219
r_symmetry_vdw_refined0.211
r_symmetry_hbond_refined0.198
r_chiral_restr0.102
r_bond_refined_d0.017
r_gen_planes_refined0.009
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2569
Nucleic Acid Atoms
Solvent Atoms425
Heterogen Atoms20

Software

Software
Software NamePurpose
REFMACrefinement
SBC-Collectdata collection
HKL-3000data reduction
HKL-3000data scaling
SHELXDphasing
MLPHAREphasing
DMphasing
SOLVEphasing
RESOLVEphasing
HKL-3000phasing