X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP5.62910.2 M Ammonium sulfate, 0.1 M Sodium citrate, pH 5.6, 20 % PEG4000, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
2.4149.07

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 47.27α = 90
b = 62.55β = 90
c = 170.192γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315mirrors2006-04-02MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID0.97912APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.29837.7199.20.10810.114.32313823138
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.2982.38950.6012.218.22186

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.29837.712059020590233498.450.2290.2290.2220.288RANDOM64.017
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.340.011.33
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.476
r_dihedral_angle_3_deg19.244
r_dihedral_angle_4_deg16.773
r_dihedral_angle_1_deg6.621
r_scangle_it3.183
r_scbond_it2.179
r_angle_refined_deg1.57
r_mcangle_it1.452
r_mcbond_it0.991
r_symmetry_hbond_refined0.225
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.476
r_dihedral_angle_3_deg19.244
r_dihedral_angle_4_deg16.773
r_dihedral_angle_1_deg6.621
r_scangle_it3.183
r_scbond_it2.179
r_angle_refined_deg1.57
r_mcangle_it1.452
r_mcbond_it0.991
r_symmetry_hbond_refined0.225
r_nbd_refined0.223
r_xyhbond_nbd_refined0.198
r_symmetry_vdw_refined0.195
r_chiral_restr0.102
r_bond_refined_d0.017
r_gen_planes_refined0.005
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3586
Nucleic Acid Atoms
Solvent Atoms166
Heterogen Atoms20

Software

Software
Software NamePurpose
REFMACrefinement
SBC-Collectdata collection
HKL-2000data reduction
HKL-2000data scaling
HKL-3000phasing
SHELXCDphasing
SHELXDphasing
SHELXEmodel building
MLPHAREphasing
SOLVEphasing
RESOLVEphasing
PHENIXphasing