2M5O

Solution NMR Structure CTD domain of NFU1 Iron-Sulfur Cluster Scaffold Homolog from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR2876C


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.0 mM [U-100% 13C; U-100% 15N] HR2876C.003, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN390% H2O/10% D2O6.5ambient298
22D 1H-13C HSQC1.0 mM [U-100% 13C; U-100% 15N] HR2876C.003, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN390% H2O/10% D2O6.5ambient298
33D HNCO1.0 mM [U-100% 13C; U-100% 15N] HR2876C.003, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN390% H2O/10% D2O6.5ambient298
43D CBCA(CO)NH1.0 mM [U-100% 13C; U-100% 15N] HR2876C.003, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN390% H2O/10% D2O6.5ambient298
53D HNCACB1.0 mM [U-100% 13C; U-100% 15N] HR2876C.003, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN390% H2O/10% D2O6.5ambient298
63D 1H-13C arom NOESY1.0 mM [U-100% 13C; U-100% 15N] HR2876C.003, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN390% H2O/10% D2O6.5ambient298
73D simutaneous 13C-aromatic,13C-aliphatic,15N edited 1H-1H NOESY1.0 mM [U-100% 13C; U-100% 15N] HR2876C.003, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN390% H2O/10% D2O6.5ambient298
82D 1H-15N HSQC1.0 mM [U-100% 13C; U-100% 15N] HR2876C.003, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN390% H2O/10% D2O6.5ambient298
93D HCCH-TOCSY1.0 mM [U-100% 13C; U-100% 15N] HR2876C.003, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN3, 1.0 mM [U-10% 13C; U-100% 15N] HR2876C.006, 5 mM DTT, 100 mM NaCl, 10 mM Tris-HCl pH 7.5, 0.02 % NaN390% H2O/10% D2O6.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2VarianINOVA600
3VarianINOVA600
NMR Refinement
MethodDetailsSoftware
distance geometry, simulated annealing, molecular dynamics, nullnull, nullCNS
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinemen,structure solution,geometry optimizationCNSBrunger, Adams, Clore, Gros, Nilges and Read
2refinement,geometry optimization,structure solutionCYANA3.0Guntert, Mumenthaler and Wuthrich
3data analysis,refinementAutoStructure2.1Huang, Tejero, Powers and Montelione
4data analysis,chemical shift assignmentAutoAssign2.1Zimmerman, Moseley, Kulikowski and Montelione
5processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
6data analysis,peak picking,chemical shift assignmentXEASYBartels et al.
7collectionTopSpinBruker Biospin
8collectionVnmrJVarian
9data analysisSparkyGoddard
10geometry optimizationTALOS+Shen, Cornilescu, Delaglio and Bax
11geometry optimizationREDCATValafar, Prestegard
12structure validationPSVSBhattacharya, Montelione
13refinementCYANA
14refinementCNS
15refinementAutoStructure