SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
115N HSQC1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O104.51 atm303
215N NOESY-HSQC1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O104.51 atm303
313C CT-HSQC1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA100% D2O104.51 atm303
4aromatic 13C CT-HSQC1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA100% D2O104.51 atm303
513C NOESY-HSQC1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA100% D2O104.51 atm303
613C aromatic NOESY-HSQC1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA100% D2O104.51 atm303
7HNCO1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O104.51 atm303
8HNCACO1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O104.51 atm303
9HNCA1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O104.51 atm303
10HNCOCA1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O104.51 atm303
11HNCACB1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O104.51 atm303
12CBCACONH1 mM [U-13C; U-15N] C-type lectin, 10 mM sodium acetate, 0.1 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O104.51 atm303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
simulating annealingRefinement in a box of waterCCPN
NMR Ensemble Information
Conformer Selection Criteria20 structures for lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentCCPN2.1.5CCPN
2peak pickingCCPN2.1.5CCPN
3structure solutionCNS1.21Brunger, Adams, Clore, Gros, Nilges and Read
4refinementCNS1.21Brunger, Adams, Clore, Gros, Nilges and Read
5structure solutionARIA2.3Linge, O'Donoghue and Nilges
6processingNMRPipe5.4Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
7collectionVnmrJ2.2DVarian
8collectionTopSpinBruker Biospin
9collectionMddNMR2.0Orekhov, Jaravine, Kazimierczuk
10processingMddNMR2.0Orekhov, Jaravine, Kazimierczuk
11collectionMDDGUI1.0Lemak, Gutmanas, Chitayat, Karra, Fares, Sunnerhagen, Arrowsmith
12processingMDDGUI1.0Lemak, Gutmanas, Chitayat, Karra, Fares, Sunnerhagen, Arrowsmith