2LEQ

Chemical Shift Assignment and Solution Structure of ChR145 from Cytophaga Hutchinsonii, Northeast Structural Genomics Consortium Target ChR145


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
22D 1H-13C HSQC aromatic0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
33D CBCA(CO)NH0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
43D C(CO)NH0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
53D HNCO0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
63D HNCACB0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
73D HBHA(CO)NH0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
83D H(CCO)NH0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
93D HCCH-TOCSY0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
103D 1H-15N NOESY0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
113D 1H-13C NOESY aliphatic0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
123D 1H-13C NOESY aromatic0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES95% H2O/5% D2O2006.5ambient298
13NH J-Modulation0.57 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES, 12.5 mg Pf1 phage95% H2O/5% D2O2006.5ambient298
14NH J-Modulation0.57 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES, 4 % C12E5/Hexanol95% H2O/5% D2O2006.5ambient298
15NH J-Modulation0.85 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride-25, 20 mM MES-26, 5 % Polyacrylamide-2795% H2O/5% D2O2006.5ambient298
16NC J-Modulation0.57 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES, 12.5 mg Pf1 phage95% H2O/5% D2O2006.5ambient298
17NC J-Modulation0.57 mM [U-100% 13C; U-100% 15N] ChR145, 0.2 % sodium azide, 5 mM DTT, 5 mM CaCl2, 200 mM sodium chloride, 20 mM MES, 4 % C12E5/Hexanol95% H2O/5% D2O2006.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number50
Conformers Submitted Total Number10
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
2data analysisNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3peak pickingSparkyGoddard
4chemical shift assignmentSparkyGoddard
5refinementX-PLOR NIH2.18Schwieters, Kuszewski, Tjandra and Clore
6validationPSVSBhattacharya and Montelione