2L6R

High resolution NMR structure of gpW (W protein of bacteriophage lambda) at acidic pH


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1 mM [U-13C; U-15N] gpW-1, 20 mM glycine buffer90% H2O/10% D2O
23D HNCACB1 mM [U-13C; U-15N] gpW-1, 20 mM glycine buffer90% H2O/10% D2O
33D CBCA(CO)NH1 mM [U-13C; U-15N] gpW-1, 20 mM glycine buffer90% H2O/10% D2O
43D C(CO)NH1 mM [U-13C; U-15N] gpW-1, 20 mM glycine buffer90% H2O/10% D2O
53D HNCO1 mM [U-13C; U-15N] gpW-1, 20 mM glycine buffer90% H2O/10% D2O
63D HBHA(CO)NH1 mM [U-13C; U-15N] gpW-1, 20 mM glycine buffer90% H2O/10% D2O
73D H(CCO)NH1 mM [U-13C; U-15N] gpW-1, 20 mM glycine buffer90% H2O/10% D2O
83D 1H-15N NOESY1 mM [U-13C; U-15N] gpW-1, 20 mM glycine buffer90% H2O/10% D2O
94D 1H-13C NOESY1 mM [U-13C; U-15N] gpW-2, 20 mM glycine buffer100% D2O0.023.5ambient293.1
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
DGSA-distance geometry simulated annealing, distance geometryNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number19
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1data analysisNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3peak pickingPIPPGarrett
4chemical shift assignmentPIPPGarrett
5structure solutionX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
6refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
7geometry optimizationX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
8structure solutionTALOS+