2L0T

Solution structure of the complex of ubiquitin and the VHS domain of Stam2


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC250 uM [U-99% 15N] Ubiquitin protein, 250 uM [U-99% 15N] VHS domain of Stam290% H2O/10% D2O206.8ambient288
215N R1 AND R2250 uM [U-99% 15N] Ubiquitin protein, 250 uM [U-99% 15N] VHS domain of Stam290% H2O/10% D2O206.8ambient288
315N{1H} NOE250 uM [U-99% 15N] Ubiquitin protein, 250 uM [U-99% 15N] VHS domain of Stam290% H2O/10% D2O206.8ambient288
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2BrukerDRX900
NMR Refinement
MethodDetailsSoftware
simulated annealing, distance geometryCNS-HADDOCK
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number300
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCNS-HADDOCK1.2Brunger, Adams, Clore, Gros, Nilges, Read, Dominguez, Boelens, Bonvin
2chemical shift assignmentSparkyGoddard
3processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4refinementCNS-HADDOCK1.2Brunger, Adams, Clore, Gros, Nilges, Read, Dominguez, Boelens, Bonvin