2KWJ

Solution structures of the double PHD fingers of human transcriptional protein DPF3 bound to a histone peptide containing acetylation at lysine 14


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY100 mM potassium phosphate, 2 mM DTT100% D2O6.5ambient298
23D 1H-13C NOESY100 mM potassium phosphate, 2 mM DTT100% D2O6.5ambient298
33D_13C-Edited_13C/15N-filtered NOEST100 mM potassium phosphate, 2 mM DTT100% D2O6.5ambient298
43D HNCACB100 mM potassium phosphate, 2 mM DTT100% D2O6.5ambient298
53D HN(COCA)CB100 mM potassium phosphate, 2 mM DTT100% D2O6.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE900
2BrukerAVANCE800
3BrukerAVANCE600
4BrukerDRX500
NMR Refinement
MethodDetailsSoftware
DGSA-distance geometry simulated annealing, torsion angle dynamicsARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThe structures were determined using triple-resonance NMR spectroscopy
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementARIA2.2Linge, O'Donoghue and Nilges
2processingNMRPipe2.3Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3data analysisNMRView5.04Johnson, One Moon Scientific
4structure solutionCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read