2KP4

Structure of 2'F-ANA/RNA hybrid duplex


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY0.8 mM FANA/RNA-190% H2O/10% D2O7ambient298
22D DQF-COSY0.8 mM FANA/RNA-190% H2O/10% D2O7ambient298
32D 1H-1H NOESY0.8 mM FANA/RNA-190% H2O/10% D2O7ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAdvance600
NMR Refinement
MethodDetailsSoftware
molecular dynamics, matrix relaxationAmber
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number10
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
2peak pickingAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
3structure solutionAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
4refinementAmberGoddard
5peak pickingAmberGoddard
6structure solutionAmberGoddard
7refinementAmberKoradi, Billeter and Wuthrich
8peak pickingAmberKoradi, Billeter and Wuthrich
9structure solutionAmberKoradi, Billeter and Wuthrich