2KOB

Solution NMR structure of CLOLEP_01837 (fragment 61-160) from Clostridium leptum. Northeast Structural Genomics Consortium Target QlR8A


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
22D 1H-13C HSQC20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
33D 1H-15N NOESY20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
43D 1H-13C NOESY aliph20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
53D HNCO20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
63D HNCA20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
73D HN(CO)CA20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
83D CBCA(CO)NH20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
93D HNCACB20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
103D HBHA(CO)NH20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
113D HCCH-TOCSY20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
123D HCCH-COSY20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
133D HCCH-TOCSY20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
144D HCCH NOESY20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein100% D2O2006.5ambient298
153D 1H-13C NOESY arom20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 10 mM DTT, 0.02 % sodium azide, 0.9 mM [U-100% 13C; U-100% 15N] protein95% H2O/5% D2O2006.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2BrukerAVANCE III850
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS water refinementNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2008Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2collectionVNMR6.1CVarian
3collectionTopSpin2.1.4Bruker Biospin
4data analysisAutoStructure2.2.1Huang, Tejero, Powers and Montelione
5structure solutionX-PLOR NIH2.20Schwieters, Kuszewski, Tjandra and Clore
6data analysisSparky3.113Goddard
7structure validationPSVS1.3Bhattacharya and Montelione
8chemical shift assignmentAutoAssign2.3.0Zimmerman, Moseley, Kulikowski and Montelione
9data analysisPdbStat5.0(PDBStat) R. Tejero, G.T. Montelione
10refinementCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read