2KK2
NMR solution structure of the pheromone En-A1 from Euplotes nobilii
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D DQF-COSY | 1.0 mM En-A1, 20 mM sodium phosphate | 90% H2O/10% D2O | 6.0 | ambient | 298 | ||
2 | 2D 1H-1H TOCSY | 1.0 mM En-A1, 20 mM sodium phosphate | 90% H2O/10% D2O | 6.0 | ambient | 298 | ||
3 | 2D 1H-13C HSQC | 1.0 mM En-A1, 20 mM sodium phosphate | 90% H2O/10% D2O | 6.0 | ambient | 298 | ||
4 | 2D 1H-1H NOESY | 1.0 mM En-A1, 20 mM sodium phosphate | 90% H2O/10% D2O | 6.0 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
2 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | CARA |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 80 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | CARA | 1.5 | Keller and Wuthrich |
2 | peak picking | ATNOS | Herrmann, Guntert and Wuthrich | |
3 | collection of distance restraints | CANDID | Herrmann, Guntert and Wuthrich | |
4 | simulated annealing | CYANA | 1.x | Guntert, Mumenthaler and Wuthrich |
5 | refinement | OPAL | Luginbuhl, Guntert, Billeter and Wuthrich |