2KHH

Structural requirements for the UBA domain of the mRNA export factor Mex67 to bind its specific targets, the transcription elongation Tho complex component Hpr1 and nucleoporin FxFG repeats


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1 mM [U-100% 13C; U-100% 15N] Mex67-1, 5 mM FxFG-2, 25 mM sodium phosphate-3, 50 mM sodium chloride-490% H2O/10% D2O7.4ambient300
22D 1H-13C HSQC1 mM [U-100% 13C; U-100% 15N] Mex67-1, 5 mM FxFG-2, 25 mM sodium phosphate-3, 50 mM sodium chloride-490% H2O/10% D2O7.4ambient300
33D CBCA(CO)NH1 mM [U-100% 13C; U-100% 15N] Mex67-1, 5 mM FxFG-2, 25 mM sodium phosphate-3, 50 mM sodium chloride-490% H2O/10% D2O7.4ambient300
43D HNCACB1 mM [U-100% 13C; U-100% 15N] Mex67-1, 5 mM FxFG-2, 25 mM sodium phosphate-3, 50 mM sodium chloride-490% H2O/10% D2O7.4ambient300
53D HBHA(CO)NH1 mM [U-100% 13C; U-100% 15N] Mex67-1, 5 mM FxFG-2, 25 mM sodium phosphate-3, 50 mM sodium chloride-490% H2O/10% D2O7.4ambient300
63D HCCH-TOCSY1 mM [U-100% 13C; U-100% 15N] Mex67-1, 5 mM FxFG-2, 25 mM sodium phosphate-3, 50 mM sodium chloride-490% H2O/10% D2O7.4ambient300
73D HCCH-COSY1 mM [U-100% 13C; U-100% 15N] Mex67-1, 5 mM FxFG-2, 25 mM sodium phosphate-3, 50 mM sodium chloride-490% H2O/10% D2O7.4ambient300
83D 1H-13C NOESY1 mM [U-100% 13C; U-100% 15N] Mex67-1, 5 mM FxFG-2, 25 mM sodium phosphate-3, 50 mM sodium chloride-490% H2O/10% D2O7.4ambient300
93D 1H-15N NOESY1 mM [U-100% 13C; U-100% 15N] Mex67-1, 5 mM FxFG-2, 25 mM sodium phosphate-3, 50 mM sodium chloride-490% H2O/10% D2O7.4ambient300
102D 1H-1H TOCSY5 mM FxFG-5, 25 mM sodium phosphate-6, 50 mM sodium chloride-790% H2O/10% D2O7.4ambient300
112D 1H-1H NOESY5 mM FxFG-5, 25 mM sodium phosphate-6, 50 mM sodium chloride-790% H2O/10% D2O7.4ambient300
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX500
NMR Refinement
MethodDetailsSoftware
simulated annealingXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR3.6Bruker Biospin
2processingXwinNMR3.6Bruker Biospin
3structure solutionX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
4chemical shift assignmentCCPNMR1.0.18CCPN
5structure solutionTALOSCornilescu, Delaglio and Bax
6refinementTALOSCornilescu, Delaglio and Bax