2KDR
Solution structure of HCV NS4B(227-254)
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-1H NOESY | 2mM protein-1 | 50% v/v Trifluoro Ethanol D2OH; 50% v/v H2O | none | 6 | ambient | 298 | |
| 2 | 2D 1H-1H TOCSY | 2mM protein-1 | 50% v/v Trifluoro Ethanol D2OH; 50% v/v H2O | none | 6 | ambient | 298 | |
| 3 | 2D 1H-13C HSQC | 2mM protein-1 | 50% v/v Trifluoro Ethanol D2OH; 50% v/v H2O | none | 6 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| distance geometry, simulated annealing | Sparky | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 50 |
| Conformers Submitted Total Number | 27 |
| Representative Model | 1 (closest to the average) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | data analysis | Sparky | Goddard | |
| 2 | refinement | XPLOR-NIH | 2.21 | Schwieters, Kuszewski, Tjandra and Clore |
| 3 | structure solution | X-PLOR | Brunger | |
