2KCF

The NMR solution structure of the isolated Apo Pin1 WW domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D DQF-COSYmM PIN1, 50 mM potassium phosphate-2, 0.02% v/v sodium azide-3, trace % DSS-490% H2O/10% D2O06.2ambient278
22D 1H-1H TOCSYmM PIN1, 50 mM potassium phosphate-2, 0.02% v/v sodium azide-3, trace % DSS-490% H2O/10% D2O06.2ambient278
32D 1H-1H NOESYmM PIN1, 50 mM potassium phosphate-2, 0.02% v/v sodium azide-3, trace % DSS-490% H2O/10% D2O06.2ambient278
42D DQF-COSYmM PIN1, 50 mM potassium phosphate-6, 0.02% v/v sodium azide-7, trace % DSS-8100% D2O06.2ambient278
52D 1H-1H TOCSYmM PIN1, 50 mM potassium phosphate-6, 0.02% v/v sodium azide-7, trace % DSS-8100% D2O06.2ambient278
62D 1H-1H NOESYmM PIN1, 50 mM potassium phosphate-6, 0.02% v/v sodium azide-7, trace % DSS-8100% D2O06.2ambient278
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAMX600
2BrukerDMX750
3BrukerDRX800
NMR Refinement
MethodDetailsSoftware
simulated annealing, molecular dynamicsPROSA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingPROSAGuntert
2chemical shift assignmentXEASYBartels et al.
3peak pickingXEASYBartels et al.
4chemical shift assignmentGARANTBartels, Guntert, Billeter and Wuthrich
5refinementAmberOPALCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
6structure solutionDYANAGuntert, Braun and Wuthrich