2K8C

Solution structure of PLAA family ubiquitin binding domain (PFUC) trans isomer in complex with ubiquitin


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.2 mM [U-100% 15N] Ubiquitin, 90% H2O, 10% D2O90% H2O/10% D2O50mM NaCl6.5ambient298
22D 1H-15N HSQC0.2 mM [U-100% 15N] PFUC_trans, 90% H2O, 10% D2O90% H2O/10% D2O50mM NaCl6.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITY600
NMR Refinement
MethodDetailsSoftware
simulated annealingThe structures were calculated with HADDOCK by NMR restraint-guided dockingCNS
NMR Ensemble Information
Conformer Selection Criteria10 structures for lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read