2JXX

NMR solution structure of Ubiquitin-like domain of NFATC2IP. Northeast Structural Genomics Consortium target HR5627


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-15N] NFATC2IP, 0.01 mM ZnSO490% H2O/10% D2O50081 atm298
22D 1H-13C Constant Time HSQC500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO4100% D2O50081 atm298
33D HNCO500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO490% H2O/10% D2O50081 atm298
43D HNCA500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO490% H2O/10% D2O50081 atm298
53D CBCA(CO)NH500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO490% H2O/10% D2O50081 atm298
63D HBHA(CO)NH500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO490% H2O/10% D2O50081 atm298
73D 1H-13C NOESY500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO490% H2O/10% D2O50081 atm298
83D 1H-13C Aromatic NOESY500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO490% H2O/10% D2O50081 atm298
93D HCCH-TOCSY500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO4100% D2O50081 atm298
103D HCCH-TOCSY500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO4100% D2O50081 atm298
112D 1H-15N HSQC500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO490% H2O/10% D2O50081 atm298
122D 1H-15N IPAP HSQC500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO490% H2O/10% D2O50081 atm298
132D 1H-15N IPAP HSQC500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO4, 12 mg/mL Pf1 co-solvent Protease free Phage90% H2O/10% D2O50081 atm298
143D 1H-15N NOESY500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO490% H2O/10% D2O50081 atm298
153D 1H-13C NOESY500 mM NaCl, 50 mM Tris-HCl, 1 mM Benzamidine, 0.01 % NaN3, 0.9 mM [U-13C; U-15N] NFATC2IP, 0.01 mM ZnSO4100% D2O50081 atm298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE500
2BrukerAVANCE600
3BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
molecular dynamicsRestrained molecular dynamics in explicit water bath.CNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read
2refinementCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read
3processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4data analysisTALOSCornilescu, Delaglio and Bax
5peak pickingSparkyGoddard
6collectionTopSpinBruker Biospin
7refinementPSVSBhattacharya and Montelione
8refinementWHAT IFVriend