2JXO

Structure of the second PDZ domain of NHERF-1


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY1 mM PDZ2, HEPES, DTT, H2O, DSS95% H2O/5% D2O0.157.5ambient288.1
22D 1H-1H NOESY1 mM PDZ2, HEPES, DTT, H2O, DSS95% H2O/5% D2O0.157.5ambient288.1
32D 1H-15N HSQC1 mM [U-100% 15N] PDZ2, HEPES, DTT, H2O, DSS95% H2O/5% D2O0.157.5ambient288.1
43D 1H-15N NOESY1 mM [U-100% 15N] PDZ2, HEPES, DTT, H2O, DSS95% H2O/5% D2O0.157.5ambient288.1
53D 1H-15N TOCSY1 mM [U-100% 15N] PDZ2, HEPES, DTT, H2O, DSS95% H2O/5% D2O0.157.5ambient288.1
63D HNHA1 mM [U-100% 15N] PDZ2, HEPES, DTT, H2O, DSS95% H2O/5% D2O0.157.5ambient288.1
73D HNCO1 mM [U-100% 13C; U-100% 15N] PDZ2, HEPES, DTT, H2O, DSS90% H2O/10% D2O0.157.5ambient288.1
83D HNCACB1 mM [U-100% 13C; U-100% 15N] PDZ2, HEPES, DTT, H2O, DSS90% H2O/10% D2O0.157.5ambient288.1
93D HN(COCA)CB1 mM [U-100% 13C; U-100% 15N] PDZ2, HEPES, DTT, H2O, DSS90% H2O/10% D2O0.157.5ambient288.1
103D HCCH-COSY1 mM [U-100% 13C; U-100% 15N] PDZ2, HEPES, DTT, H2O, DSS90% H2O/10% D2O0.157.5ambient288.1
113D HCCH-TOCSY1 mM [U-100% 13C; U-100% 15N] PDZ2, HEPES, DTT, H2O, DSS90% H2O/10% D2O0.157.5ambient288.1
123D 1H-13C NOESY1 mM [U-100% 13C; U-100% 15N] PDZ2, HEPES, DTT, H2O, DSS90% H2O/10% D2O0.157.5ambient288.1
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX600
NMR Refinement
MethodDetailsSoftware
DGSA-distance geometry simulated annealingFelix
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number1000
Conformers Submitted Total Number12
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingFelix2000Accelrys Software Inc.
2chemical shift calculationFelix2000Accelrys Software Inc.
3chemical shift assignmentSparkyGoddard
4peak pickingSparkyGoddard
5data analysisSparkyGoddard
6structure solutionCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
7collectionXwinNMRBruker Biospin
8chemical shift calculationXwinNMRBruker Biospin
9refinementCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read