2JXM
Ensemble of twenty structures of the Prochlorothrix hollandica plastocyanin- cytochrome f complex
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 85 uM [U-99% 15N] plastocyanin, 50 uM cytochrome f | 95% H2O/5% D2O | 10 | 6.0 | ambient | 300 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 600 |
NMR Refinement | ||
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Method | Details | Software |
Rigid Body docking, Energy minimisation | Rigid Body docking based on PDB entry 1B3I and a homology model of cytochrome f. Docking energies based on pseudocontact and chemical shift perturbation restraints. Energy minimisation of side-chains. | TopSpin |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 1000 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | Bruker Biospin | |
2 | processing | Azara | Boucher, W. | |
3 | data analysis | Azara | Boucher, W. | |
4 | processing | ANSIG | Kraulis, P.J. | |
5 | data analysis | ANSIG | Kraulis, P.J. | |
6 | refinement | X-PLOR NIH | Schwieters, C.D. et al. |