2JS0

Solution structure of second SH3 domain of adaptor Nck


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY0.5-1.0 mM [U-99% 13C; U-99% 15N] Nck1-2, 20 mM sodium phosphate, 100 mM sodium chloride, 2 mM sodium azide, 1 mM EDTA, 4 mM DTT90% H2O/10% D2O1006.1AMBIENT310
23D 1H-13C NOESY0.5-1.0 mM [U-99% 13C; U-99% 15N] Nck1-2, 20 mM sodium phosphate, 100 mM sodium chloride, 2 mM sodium azide, 1 mM EDTA, 4 mM DTT90% H2O/10% D2O1006.1AMBIENT310
32D 1H-1H NOESY0.5-1.0 mM [U-99% 13C; U-99% 15N] Nck1-2, 20 mM sodium phosphate, 100 mM sodium chloride, 2 mM sodium azide, 1 mM EDTA, 4 mM DTT90% H2O/10% D2O1006.1AMBIENT310
42D 1H-15N HSQC0.5-1.0 mM [U-99% 13C; U-99% 15N] Nck1-2, 20 mM sodium phosphate, 100 mM sodium chloride, 2 mM sodium azide, 1 mM EDTA, 4 mM DTT90% H2O/10% D2O1006.1AMBIENT310
52D 1H-13C HSQC0.5-1.0 mM [U-99% 13C; U-99% 15N] Nck1-2, 20 mM sodium phosphate, 100 mM sodium chloride, 2 mM sodium azide, 1 mM EDTA, 4 mM DTT90% H2O/10% D2O1006.1AMBIENT310
63D HNCO0.5-1.0 mM [U-99% 13C; U-99% 15N] Nck1-2, 20 mM sodium phosphate, 100 mM sodium chloride, 2 mM sodium azide, 1 mM EDTA, 4 mM DTT90% H2O/10% D2O1006.1AMBIENT310
73D HNCACB0.5-1.0 mM [U-99% 13C; U-99% 15N] Nck1-2, 20 mM sodium phosphate, 100 mM sodium chloride, 2 mM sodium azide, 1 mM EDTA, 4 mM DTT90% H2O/10% D2O1006.1AMBIENT310
83D CBCA(CO)NH0.5-1.0 mM [U-99% 13C; U-99% 15N] Nck1-2, 20 mM sodium phosphate, 100 mM sodium chloride, 2 mM sodium azide, 1 mM EDTA, 4 mM DTT90% H2O/10% D2O1006.1AMBIENT310
93D H(CCO)NH0.5-1.0 mM [U-99% 13C; U-99% 15N] Nck1-2, 20 mM sodium phosphate, 100 mM sodium chloride, 2 mM sodium azide, 1 mM EDTA, 4 mM DTT90% H2O/10% D2O1006.1AMBIENT310
103D HCCH-TOCSY0.5-1.0 mM [U-99% 13C; U-99% 15N] Nck1-2, 20 mM sodium phosphate, 100 mM sodium chloride, 2 mM sodium azide, 1 mM EDTA, 4 mM DTT90% H2O/10% D2O1006.1AMBIENT310
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianINOVA500
3BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3data analysisNMRView5.2.1Johnson, One Moon Scientific
4peak pickingNMRView5.2.1Johnson, One Moon Scientific
5chemical shift assignmentNMRView5.2.1Johnson, One Moon Scientific
6water refinementCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read
7refinementCYANA2.1Guntert, Mumenthaler and Wuthrich