2JRE

C60-1, a PDZ domain designed using statistical coupling analysis


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY1 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 25 mM sodium phosphate, 0.02 % sodium azide90% H2O/10% D2O6.5288
23D 1H-13C NOESY1 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 25 mM sodium phosphate, 0.02 % sodium azide100% D2O6.5288
32D 1H-15N HSQC1 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 25 mM sodium phosphate, 0.02 % sodium azide90% H2O/10% D2O6.5288
42D 1H-13C HSQC1 mM [U-10% 13C] protein, 50 mM sodium chloride, 25 mM sodium phosphate, 0.02 % sodium azide90% H2O/10% D2O6.5288
53D CBCA(CO)NH1 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 25 mM sodium phosphate, 0.02 % sodium azide90% H2O/10% D2O6.5288
63D HNCACB1 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 25 mM sodium phosphate, 0.02 % sodium azide90% H2O/10% D2O6.5288
73D HNCO1 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 25 mM sodium phosphate, 0.02 % sodium azide90% H2O/10% D2O6.5288
83D C(CO)NH1 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 25 mM sodium phosphate, 0.02 % sodium azide90% H2O/10% D2O6.5288
93D H(CCO)NH1 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 25 mM sodium phosphate, 0.02 % sodium azide90% H2O/10% D2O6.5288
103D HCCH-TOCSY1 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 25 mM sodium phosphate, 0.02 % sodium azide100% D2O6.5288
112D 1H-15N HSQC1 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium chloride, 25 mM sodium phosphate, 0.02 % sodium azide90% H2O/10% D2O
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITY600
2VarianUNITY500
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number25
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionARIA1.2Linge, O'Donoghue and Nilges
2structure solutionCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read
3peak pickingNMRViewJohnson, One Moon Scientific
4processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5refinementCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read