2JQI

NMR Structure of the Rad53 FHA1 domain in complex with a phosphothreonien peptide derived from Rad53 SCD1


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-13C NOESY0.5 mM [U-13C; U-15N] protein, 0.8 mM peptide, 10 mM sodium phosphate, 1 mM DTT, 1 mM EDTA100% D2O10 mM sodium phosphate6.5ambient293
23D 13C/15N-filtered (f1), 13C-edited (f3) NOESY0.5 mM [U-13C; U-15N] protein, 0.8 mM peptide, 10 mM sodium phosphate, 1 mM DTT, 1 mM EDTA90% H2O/10% D2O10 mM sodium phosphate6.5ambient293
33D 13C/15N-filtered (f1), 13C-edited (f3) NOESY0.5 mM [U-13C; U-15N] protein, 0.8 mM peptide, 10 mM sodium phosphate, 1 mM DTT, 1 mM EDTA100% D2O10 mM sodium phosphate6.5ambient293
43D 13C-edited (f1), 13C/15N-filtered (f3) NOESY0.5 mM [U-13C; U-15N] protein, 0.8 mM peptide, 10 mM sodium phosphate, 1 mM DTT, 1 mM EDTA100% D2O10 mM sodium phosphate6.5ambient293
52D 13C/15N-filtered (f1,f2) NOESY0.5 mM [U-13C; U-15N] protein, 0.8 mM peptide, 10 mM sodium phosphate, 1 mM DTT, 1 mM EDTA90% H2O/10% D2O10 mM sodium phosphate6.5ambient293
62D 13C/15N-filtered (f1,f2) NOESY0.5 mM [U-13C; U-15N] protein, 0.8 mM peptide, 10 mM sodium phosphate, 1 mM DTT, 1 mM EDTA100% D2O10 mM sodium phosphate6.5ambient293
72D 13C/15N-filtered (f1,f2) TOCSY0.5 mM [U-13C; U-15N] protein, 0.8 mM peptide, 10 mM sodium phosphate, 1 mM DTT, 1 mM EDTA90% H2O/10% D2O10 mM sodium phosphate6.5ambient293
82D 13C/15N-filtered (f1,f2) TOCSY0.5 mM [U-13C; U-15N] protein, 0.8 mM peptide, 10 mM sodium phosphate, 1 mM DTT, 1 mM EDTA100% D2O10 mM sodium phosphate6.5ambient293
92D 13C/15N-filtered (f1,f2) COSY0.5 mM [U-13C; U-15N] protein, 0.8 mM peptide, 10 mM sodium phosphate, 1 mM DTT, 1 mM EDTA100% D2O10 mM sodium phosphate6.5ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX800
2BrukerDMX600
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry,structures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCNS1.1Brunger, A.T. et al.
2processingNMRPipeDelaglio, F. et al.
3data analysisNMRViewJohnson, B.A. et al.
4refinementCNS1.1Brunger, A.T. et al.