2JNJ

Solution structure of the p8 TFIIH subunit


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC300 uM [U-99% 15N] protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
22D 1H-13C HSQC300 uM [U-99% 13C, U-99% 15N] protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
32D 1H-1H TOCSY300 uM protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
42D 1H-1H NOESY300 uM protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
53D HNCO300 uM [U-99% 13C, U-99% 15N] protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
63D HNCA300 uM [U-99% 13C, U-99% 15N] protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
73D HNCACB300 uM [U-99% 13C, U-99% 15N] protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
83D HN(CO)CA300 uM [U-99% 13C, U-99% 15N] protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
93D HCCH-TOCSY300 uM [U-99% 13C, U-99% 15N] protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
103D HCCH-COSY300 uM [U-99% 13C, U-99% 15N] protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
113D 1H-15N NOESY300 uM [U-99% 15N] protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
123D 1H-15N TOCSY300 uM [U-99% 15N] protein, 2.5 mM beta-mercaptoethanol, 50 mM sodium chloride, 10 mM TRIS90% H2O/10% D2O507.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX500
2BrukerDRX600
NMR Refinement
MethodDetailsSoftware
simulated annealingNMR WaterRefine ProtocolX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number40
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
2peak pickingXEASYBartels et al.
3chemical shift assignmentARIALinge, O'Donoghue and Nilges
4geometry optimizationTALOSCornilescu, Delaglio and Bax
5refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore