2I2Y

Solution structure of the RRM of SRp20 bound to the RNA CAUC


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1HNCA1mM SRp20 13C-15N labelled + 1 mM CAUC natural abundance in 50 mM sodium dihydrogenophosphate, pH 6.4, 1mM DTT;10% D2O,90% H2O or 100% D2O6.4ambient315
2CBCA(CO)NH1mM SRp20 13C-15N labelled + 1 mM CAUC natural abundance in 50 mM sodium dihydrogenophosphate, pH 6.4, 1mM DTT;10% D2O,90% H2O or 100% D2O6.4ambient315
33D_13C-separated_NOESY1mM SRp20 13C-15N labelled + 1 mM CAUC natural abundance in 50 mM sodium dihydrogenophosphate, pH 6.4, 1mM DTT;10% D2O,90% H2O or 100% D2O6.4ambient315
43D_15N-separated_NOESY1mM SRp20 15N labelled + 1 mM CAUC natural abundance in 1mM SRp20 15N labelled in 50 mM sodium dihydrogenophosphate, pH 6.4, 1mM DTT10% D2O, 90% H2O or 100% D2O6.4ambient315
5HCCH TOCSY1mM SRp20 13C-15N labelled + 1 mM CAUC natural abundance in 50 mM sodium dihydrogenophosphate, pH 6.4, 1mM DTT;10% D2O,90% H2O or 100% D2O6.4ambient315
62D NOESY1mM SRp20 15N labelled + 1 mM CAUC natural abundance in 1mM SRp20 15N labelled in 50 mM sodium dihydrogenophosphate, pH 6.4, 1mM DTT10% D2O, 90% H2O or 100% D2O6.4ambient315
72D TOCSY1mM SRp20 15N labelled + 1 mM CAUC natural abundance in 1mM SRp20 15N labelled in 50 mM sodium dihydrogenophosphate, pH 6.4, 1mM DTT10% D2O, 90% H2O or 100% D2O6.4ambient315
83D flitered [1H,13C,1H] NOESY1mM SRp20 15N labelled + 1 mM CAUC with 13C labelled riboses and natural abundance bases in 50 mM sodium dihydrogenophosphate, pH 6.4, 1mM DTT;10% D2O, 90% H2O or 100% D2O6.4ambient315
92D filtered/edited NOESY1mM SRp20 13C-15N labelled + 1 mM CAUC natural abundance in 50 mM sodium dihydrogenophosphate, pH 6.4, 1mM DTT;10% D2O,90% H2O or 100% D2O6.4ambient315
101mM SRp20 13C-15N labelled + 1 mM CAUC natural abundance in 50 mM sodium dihydrogenophosphate, pH 6.4, 1mM DTT;10% D2O,90% H2O or 100% D2O6.4ambient315
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX900
2BrukerDRX500
3BrukerDRX600
NMR Refinement
MethodDetailsSoftware
AMBER 7DIANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number50
Conformers Submitted Total Number28
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionDIANA
2data analysisSparky
3refinementAmber 7Case and Cornell