2HGH

Transcription Factor IIIA zinc fingers 4-6 bound to 5S rRNA 55mer (NMR structure)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESYU-15N, 90% H2O, 10% D2O90% H2O/10% D2O10 mM6.51 atm291
23D_15N-separated_NOESYU-15N, 90% H2O, 10% D2O90% H2O/10% D2O10 mM6.51 atm291
33D_13C-separated_NOESYU-13C;U-15ND2O10 mM6.51 atm291
43D_15N-separated_NOESYU-2H;U-13C;U-15N, 90% H2O, 10% D2O90% H2O/10% D2O10 mM6.51 atm291
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE900
2BrukerDRX800
3BrukerDMX750
4BrukerDRX600
5BrukerAMX500
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, molecular dynamics, generalized Born solvation modelNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2.3Delaglio
2data analysisNMRView5.4Johnson
3structure solutionDYANA1.5Guntert
4refinementAmber8Case