2GPF

Solution NMR Structure of Protein PA22412 from Pseudomonas aeruginosa. Northeast Structural Genomics Consortium Target PaT86, Ontario Centre for Structural Proteomics Target PA2412.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY0.6mM pa2412, U-15N,13C, 450 mM NaCl, 10 mM MOPS, 1 mM Benzamidine, 10 mM DTT, 10 mM ZnSO4, 0.01% NAN3, 95% H2O, 5% D2O95% H2O/5% D2O450 mM NaCl6.5ambient298
23D_13C-separated_NOESY0.6mM pa2412, U-15N,13C, 450 mM NaCl, 10 mM MOPS, 1 mM Benzamidine, 10 mM DTT, 10 mM ZnSO4, 0.01% NAN3, 95% H2O, 5% D2O95% H2O/5% D2O450 mM NaCl6.5ambient298
3J modulated HSQC for RDC0.6mM pa2412, U-15N,13C, 450 mM NaCl, 10 mM MOPS, 1 mM Benzamidine, 10 mM DTT, 10 mM ZnSO4, 0.01% NAN3, 95% H2O, 5% D2O95% H2O/5% D2O450 mM NaCl6.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE500
NMR Refinement
MethodDetailsSoftware
molecular dynamics, simulated annealing1483 NOE-derived distances constraints, 78 dihedral angle restraints, 40 RDC restraintsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2.3Delaglio, F.
2data analysisSparky3.1Goddard, T.D.
3structure solutionCNS1.1Brunger, A.T.
4refinementCNS1.1Brunger, A.T.