X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP730014% PEG3350, 0.2 M Ca Acetate, 0.1 M BisTris propane, pH 7.0. , VAPOR DIFFUSION, HANGING DROP, temperature 300K
Crystal Properties
Matthews coefficientSolvent content
2.6253.07

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 65.631α = 90
b = 66.738β = 94.41
c = 95.66γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATERIGAKU RAXIS IV2006-02-02MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU1.54

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1210098.92754427544
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
22.0797.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB Entry: 2F5I232.722616026160138198.970.196350.196350.193530.24993RANDOM35.614
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.170.220.12-0.25
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.082
r_dihedral_angle_4_deg20.223
r_dihedral_angle_3_deg16.716
r_dihedral_angle_1_deg6.296
r_scangle_it4.07
r_scbond_it2.91
r_mcangle_it2.004
r_angle_refined_deg1.766
r_mcbond_it1.287
r_nbtor_refined0.31
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.082
r_dihedral_angle_4_deg20.223
r_dihedral_angle_3_deg16.716
r_dihedral_angle_1_deg6.296
r_scangle_it4.07
r_scbond_it2.91
r_mcangle_it2.004
r_angle_refined_deg1.766
r_mcbond_it1.287
r_nbtor_refined0.31
r_symmetry_vdw_refined0.256
r_nbd_refined0.226
r_xyhbond_nbd_refined0.177
r_chiral_restr0.144
r_symmetry_hbond_refined0.13
r_metal_ion_refined0.082
r_bond_refined_d0.018
r_gen_planes_refined0.008
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2687
Nucleic Acid Atoms
Solvent Atoms218
Heterogen Atoms111

Software

Software
Software NamePurpose
REFMACrefinement
SCALEPACKdata scaling
PHASERphasing