X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6295PEG3350, ammonium formate, sodium cacodilate, NDSB, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
2.551.6

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 54.13α = 90
b = 157.565β = 90
c = 85.707γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315mirrors2005-08-08MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID0.9793APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.855097.80.081011.73214831074
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.851.92850.6368.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.85502792727927312397.750.201890.201890.197010.2452RANDOM34.755
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.31.59-1.29
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.702
r_dihedral_angle_4_deg18.405
r_dihedral_angle_3_deg15.57
r_dihedral_angle_1_deg5.643
r_scangle_it3.04
r_scbond_it2.055
r_mcangle_it1.342
r_angle_refined_deg1.285
r_mcbond_it0.863
r_nbd_refined0.218
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.702
r_dihedral_angle_4_deg18.405
r_dihedral_angle_3_deg15.57
r_dihedral_angle_1_deg5.643
r_scangle_it3.04
r_scbond_it2.055
r_mcangle_it1.342
r_angle_refined_deg1.285
r_mcbond_it0.863
r_nbd_refined0.218
r_symmetry_vdw_refined0.181
r_xyhbond_nbd_refined0.167
r_symmetry_hbond_refined0.149
r_chiral_restr0.09
r_bond_refined_d0.014
r_gen_planes_refined0.005
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2484
Nucleic Acid Atoms
Solvent Atoms320
Heterogen Atoms15

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
MLPHAREphasing