2AO9

Structural Genomics, The crystal structure of a Phage protein (phBC6A51) from Bacillus cereus ATCC 14579


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP9.52981.26M (NH)4SO4, 0.1M CHES. 0.2M NaCl, pH 9.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.6753

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 114.016α = 90
b = 150.481β = 90
c = 99.975γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDSBC-3mirrors2004-10-28MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID0.9798APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.95099.60.0922.764.91356641348632230.4
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.91.9799.10.6124.825899

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.939.1128540128090677299.650.20650.20650.204940.23581RANDOM30.437
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.43-0.72-0.7
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.969
r_dihedral_angle_4_deg17.758
r_dihedral_angle_3_deg15.683
r_dihedral_angle_1_deg5.12
r_scangle_it3.22
r_scbond_it2.144
r_mcangle_it1.326
r_angle_refined_deg1.072
r_mcbond_it0.826
r_nbtor_refined0.294
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.969
r_dihedral_angle_4_deg17.758
r_dihedral_angle_3_deg15.683
r_dihedral_angle_1_deg5.12
r_scangle_it3.22
r_scbond_it2.144
r_mcangle_it1.326
r_angle_refined_deg1.072
r_mcbond_it0.826
r_nbtor_refined0.294
r_symmetry_vdw_refined0.239
r_nbd_refined0.199
r_xyhbond_nbd_refined0.196
r_symmetry_hbond_refined0.146
r_chiral_restr0.073
r_bond_refined_d0.011
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms8172
Nucleic Acid Atoms
Solvent Atoms971
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
SBC-Collectdata collection
HKL-2000data scaling
CNSphasing