X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION7293salt, pH 7, VAPOR DIFFUSION, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
3.261.52

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 104.502α = 90
b = 104.502β = 90
c = 72.351γ = 120
Symmetry
Space GroupP 32 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2004-06-02MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONMPG/DESY, HAMBURG BEAMLINE BW61.05MPG/DESY, HAMBURGBW6

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
126099.5311673101122
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.199.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.1153.42553724664129596.580.25440.217140.215260.25444RANDOM75.769
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.83-0.92-1.832.75
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.648
r_dihedral_angle_3_deg16.51
r_dihedral_angle_4_deg15.152
r_scangle_it6.4
r_dihedral_angle_1_deg5.773
r_mcangle_it5.63
r_scbond_it4.677
r_mcbond_it4.357
r_angle_refined_deg1.207
r_nbtor_refined0.304
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.648
r_dihedral_angle_3_deg16.51
r_dihedral_angle_4_deg15.152
r_scangle_it6.4
r_dihedral_angle_1_deg5.773
r_mcangle_it5.63
r_scbond_it4.677
r_mcbond_it4.357
r_angle_refined_deg1.207
r_nbtor_refined0.304
r_nbd_refined0.212
r_symmetry_hbond_refined0.199
r_symmetry_vdw_refined0.184
r_xyhbond_nbd_refined0.175
r_chiral_restr0.085
r_bond_refined_d0.009
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2215
Nucleic Acid Atoms
Solvent Atoms161
Heterogen Atoms1

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing