2A0T

NMR structure of the FHA1 domain of Rad53 in complex with a biological relevant phosphopeptide derived from Madt1


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 13C-edited 13C/15N-filtered NOESY0.5 mM FHA1 U-13C, 15N, ~0.8 mM peptide, 10 mM sodium phosphate buffer (pH 6.5), 1 mM DTT,1 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O10 mM sodium phosphate, 1 mM DTT, and 1 mM EDTA6.5ambient293
23D 13C/15N-filtered, 13C-edited NOESY0.5 mM FHA1 U-13C, 15N, ~0.8 mM peptide, 10 mM sodium phosphate buffer (pH 6.5), 1 mM DTT, 1 mM EDTA, 100% D2O100% D2O10 mM sodium phosphate, 1 mM DTT, and 1 mM EDTA6.5ambient293
33D_13C-separated_NOESY0.5 mM FHA1 U-13C, 15N, ~0.8 mM peptide, 10 mM sodium phosphate buffer (pH 6.5), 1 mM DTT, 1 mM EDTA, 100% D2O100% D2O10 mM sodium phosphate, 1 mM DTT, and 1 mM EDTA6.5ambient293
42D 13C/15N-filtered NOESY0.5 mM FHA1 U-13C, 15N, ~0.8 mM peptide, 10 mM sodium phosphate buffer (pH 6.5), 1 mM DTT,1 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O10 mM sodium phosphate, 1 mM DTT, and 1 mM EDTA6.5ambient293
52D 13C/15N-filtered TOCSY0.5 mM FHA1 U-13C, 15N, ~0.8 mM peptide, 10 mM sodium phosphate buffer (pH 6.5), 1 mM DTT, 1 mM EDTA, 100% D2O100% D2O10 mM sodium phosphate, 1 mM DTT, and 1 mM EDTA6.5ambient293
62D 13C/15N-filtered COSY0.5 mM FHA1 U-13C, 15N, ~0.8 mM peptide, 10 mM sodium phosphate buffer (pH 6.5), 1 mM DTT,1 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O10 mM sodium phosphate, 1 mM DTT, and 1 mM EDTA6.5ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX800
2BrukerDMX600
3BrukerAVANCE800
4BrukerAVANCE500
NMR Refinement
MethodDetailsSoftware
simulated annealingThe complex structures are generated using a total of 2524 NMR constraints including constraints in this PDB file and constraints of free FHA1 in PDB access code 1K3JXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry, structures with the least restraint violations, structures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (closest to the average, lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR3.5Bruker
2processingNMRPipeDelaglio, F.
3data analysisNMRView5Johnson, B.
4structure solutionCNS1.1Brunger et al.
5refinementCNS1.1Brunger et al.