1ZWT
Structure of the globular head domain of the bundlin, BfpA, of the bundle-forming pilus of Enteropathogenic E.coli
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 0.5 mM BfpA U-15N,13C, 20 mM sodium phosphate buffer pH 5.2, 90%H20, 10% D2O | 90%H20, 10% D2O | no salt | 5.2 | normal | 303 | |
2 | 3D_15N-separated_NOESY | 0.5 mM BfpA U-15N,13C, 20 mM sodium phosphate buffer pH 5.2, 90%H20, 10% D2O | 90%H20, 10% D2O | no salt | 5.2 | normal | 303 | |
3 | 3D HBHA(CBCACO)NH | 0.5 mM BfpA U-15N,13C, 20 mM sodium phosphate buffer pH 5.2, 90%H20, 10% D2O | 90%H20, 10% D2O | no salt | 5.2 | normal | 303 | |
4 | 3D HCCH-TOCSY | 0.5 mM BfpA U-15N,13C, 20 mM sodium phosphate buffer pH 5.2, 90%H20, 10% D2O | 90%H20, 10% D2O | no salt | 5.2 | normal | 303 | |
5 | 3D (H)CC(CO)NH-TOCSY | 0.5 mM BfpA U-15N,13C, 20 mM sodium phosphate buffer pH 5.2, 90%H20, 10% D2O | 90%H20, 10% D2O | no salt | 5.2 | normal | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
2 | Varian | INOVA | 800 |
NMR Refinement | ||
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Method | Details | Software |
Simulated annealing with NMR restraints using ARIA | 577 Ambiguous and 2277 unambiguous NOE restraints, 86 TALOS constraints and 38 hydrogen bonds were imposed during ARIA structure calculations. | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with acceptable covalent geometry, structures with the least restraint violations, structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 12 |
Representative Model | 12 (least number of violations, lowest energy) |
Additional NMR Experimental Information | |
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Details | Hydrogen-exchange experiments |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, Grezsiek, Bax | |
2 | data analysis | NMRView | 5.0.4 | Johnson and Blevins |
3 | refinement | ARIA | 1.2 | Linge and Nilges |