SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY0.8mM LM5-1 U-15N, 13C; 50mM sodium phosphate buffer, 50mM KCl, 1mM DTT, 1mM AEBSF, 0.05% sodium azide; 90% H2O, 10% D2O90% H2O/10% D2O7.41 atm293
23D_15N-separated_NOESY0.8mM LM5-1 U-15N, 13C; 50mM sodium phosphate buffer, 50mM KCl, 1mM DTT, 1mM AEBSF, 0.05% sodium azide; 90% H2O, 10% D2O90% H2O/10% D2O7.41 atm293
3HNHA0.8mM LM5-1 U-15N, 13C; 50mM sodium phosphate buffer, 50mM KCl, 1mM DTT, 1mM AEBSF, 0.05% sodium azide; 90% H2O, 10% D2O90% H2O/10% D2O7.41 atm293
43D_13C-separated_NOESY0.8mM LM5-1 U-15N,13C; 50mM sodium phosphate buffer, 50mM KCl, 1mM DTT, 1mM AEBSF,0.05% sodium azide; 100% D2O99.99% D2O7.41 atm293
52D_13C-ct-HSQC0.8mM LM5-1 ~10% 13C; 50mM sodium phosphate buffer, 50mM KCl, 1mM DTT, 1mM AEBSF, 0.05% sodium azide; 100% D2O90% H2O/10% D2O7.41 atm293
62D_15N-HSQC-TROSY, 2D_HN(a/b-NC-J)-TROSY, 2D_HN(CO-a/b-C'CA-J)-TROSY, 3D_1H-dec_HN(CO)CA0.8mM LM5-1 U-15N,13C; 50mM sodium phosphate buffer, 50mM KCl, 1mM DTT, 1mM AEBSF, 0.05% sodium azide; 10mg/ml PF1; 90% H2O, 10% D2O90% H2O/10% D2O7.41 atm293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA500
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealing.Structures based on 545 NOE-derived distance constraints, 101 dihedral angle restraints, and 259 residual dipolar couplings.VNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations, structures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number21
Representative Model21 (minimized average structure)
Additional NMR Experimental Information
Details2 x Zn2+ ions not included in calculations, ligating cysteines treated as protonated sulfhydryl groups during simulated annealing.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR6.1cVarian inc.
2processingNMRPipe2.2Delaglio
3data analysisXEASY1.3Bartels
4structure solutionCYANA1.0.7Guntert
5refinementXplor-NIH2.9.1