1YEZ

Solution structure of the conserved protein from the gene locus MM1357 of Methanosarcina mazei. Northeast Structural Genomics target MaR30.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY2mM MaR30 U-13C,15N, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES5% D2O/95% H2O100 mM NaCl6.5atmospheric atm293
23D_15N-separated_NOESY2mM MaR30 U-13C,15N, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES5% D2O/95% H2O100 mM NaCl6.5atmospheric atm293
33D_13C-separated_NOESY0.56mM MaR30 U-13C,15N, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES100% D2O100 mM NaCl6.5atmospheric atm293
4Hi-res CH-HSQC, HcCH-COSY0.56mM MaR30 U-13C,15N, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES100% D2O100 mM NaCl6.5atmospheric atm293
5Hi-res CH-HSQC (stereo V and L Meth.), HNHA0.78mM MaR30 U-15N,5% 13C 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES5% D2O/95% H2O100 mM NaCl6.5atmospheric atm293
6TR exp. backbone, TOCSYs, HcCH-COSY2mM MaR30 U-13C,15N, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES5% D2O/95% H2O100 mM NaCl6.5atmospheric atm293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2BrukerAvance500
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number56
Conformers Submitted Total Number10
Representative Model1 (lowest target function)
Additional NMR Experimental Information
DetailsCS assign.: Backbone AutoAssign, sidechain HcCH-COSY and TOCSYs. AutoStructure for noesy assign. Hyper Dihedral, Dyana, Xplor(nih), and CNS force-field for simulated annealing and RPF score calculation.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR6.1CVarian
2collectionXWINNMR3.5Bruker Biospin
3processingNMRPipe2.1Delaglio
4data analysisSparky3.91Goddard
5data analysisAutoAssign1.14Zimmerman,Moseley,Montelione
6refinementAutoStructure2.1.0Huang,Montelione