1X45

Solution structure of the first PDZ domain of amyloid beta A4 precursor protein-binding family A, member 1


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1.55mM 13C, 15N-labeled protein; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN390% H2O/10% D2O120mM7.0ambient293
23D_13C-separated_NOESY1.55mM 13C, 15N-labeled protein; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN390% H2O/10% D2O120mM7.0ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsVNMR
NMR Ensemble Information
Conformer Selection Criteriatarget function, structures with the lowest energy, structures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR6.1CVarian
2processingNMRPipe20031121Delaglio,F.
3data analysisNMRView5.0.4Johnson,B.A.
4data analysisKUJIRA0.9296Kobayashi,N.
5structure solutionCYANA2.0.17Guntert,P.
6refinementCYANA2.0.17Guntert,P.