1WI4
Solution structure of the PDZ domain of syntaxin binding protein 4
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_13C-separated_NOESY | 200mM 13C, 15N-labeled protein; 20mM phosphate buffer; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O | 90% H2O/10% D2O | 120 | 6.0 | ambient | 298 | |
| 2 | 3D_15N-separated_NOESY | 200mM 13C, 15N-labeled protein; 20mM phosphate buffer; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O | 90% H2O/10% D2O | 120 | 6.0 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 800 |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations, target function |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | XwinNMR | 2.6 | Bruker |
| 2 | processing | NMRPipe | 20020405 | DELAGLIO |
| 3 | data analysis | NMRView | 5.0.4 | Johonson, B. A. |
| 4 | data analysis | KUJIRA | 0.899 | Kobayashi, N. |
| 5 | structure solution | CYANA | 2.0.1 | Guentert, P. |
| 6 | refinement | CYANA | 2.0.1 | Guentert, P. |
