1U3O

Solution structure of rat Kalirin N-terminal SH3 domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1HNHA0.4 mM U-15N protein, 50 mM HEPES, 150 mM NaCl, 1 mM dithiotheitol92.5% H2O, 7.5% D2O200 mM6.4ambient298
2HNHB0.4 mM U-15N protein, 50 mM HEPES, 150 mM NaCl, 1 mM dithiotheitol92.5% H2O, 7.5% D2O200 mM6.4ambient298
33D HN(COCA)CB1 mM U-15N,13C protein, 50 mM HEPES, 150 mM NaCl, 1 mM dithiotheitol92.5% H2O, 7.5% D2O200 mM6.4ambient298
43D_C(CO)NH-TOCSY1 mM U-15N,13C protein, 50 mM HEPES, 150 mM NaCl, 1 mM dithiotheitol92.5% H2O, 7.5% D2O200 mM6.4ambient298
53D_15N_ NOESY-HSQC1 mM U-15N,13C protein, 50 mM HEPES, 150 mM NaCl, 1 mM dithiotheitol92.5% H2O, 7.5% D2O200 mM6.4ambient298
63D_13C_HSQC-NOESY1 mM U-15N,13C protein, 50 mM HEPES, 150 mM NaCl, 1 mM dithiotheitol92.5% H2O, 7.5% D2O200 mM6.4ambient298
73D HNCACB1 mM U-15N,13C protein, 50 mM HEPES, 150 mM NaCl, 1 mM dithiotheitol92.5% H2O, 7.5% D2O200 mM6.4ambient298
8HC(CO)NH-TOCSY1 mM U-15N,13C protein, 50 mM HEPES, 150 mM NaCl, 1 mM dithiotheitol92.5% H2O, 7.5% D2O200 mM6.4ambient298
9HCCH-COSY1 mM U-15N,13C protein, 50 mM HEPES, 150 mM NaCl, 1 mM dithiotheitol92.5% H2O, 7.5% D2O200 mM6.4ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA500
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
Torsion angle dynamics and simulated annealingThe structure is based on a total of 1017 restraints, with 893 NOE-derived distance constraints, 102 dihedral angle restraints, and 22 hydrogen bond restraints.DYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionDYANA1.5Guntert, P., Mumenthaler, C., and Wuthrich, K.
2structure solutionCYANA1.0.0Guntert,P.,
3refinementX-PLOR3.851Brunger, A.T.
4processingNMRPipe2.3Delaglio,F., Grzesiek,S., Vuister,G.W., Zhu,G., Pfeifer,J., and Bax,A.
5data analysisXEASY1.4Bartels,C., Xia,T., Billeter,M., Guntert,P., and Wuthrich,K.
6structure solutionTALOSCornilescu,G., Delaglio,F., and Bax,A.