1TOT

ZZ Domain of CBP- a Novel Fold for a Protein Interaction Module


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY2.3 mM solutions in degassed 10 mM Tris-d11 pH 6.8, 200 M ZnCl2, 10 mM DTT-d10, 0.05% w/v sodium azide94 % H2O, 6 % D2O10 mM6.8ambient298
23D_15N-separated_NOESY2.3 mM solutions in degassed 10 mM Tris-d11 pH 6.8, 200 M ZnCl2, 10 mM DTT-d10, 0.05% w/v sodium azide94 % H2O, 6 % D2O10 mM6.8ambient298
3HBHA(CCCO)NH TOSCY2.3 mM solutions in degassed 10 mM Tris-d11 pH 6.8, 200 M ZnCl2, 10 mM DTT-d10, 0.05% w/v sodium azide94 % H2O, 6 % D2O10 mM6.8ambient298
4CCONH TOCSY2.3 mM solutions in degassed 10 mM Tris-d11 pH 6.8, 200 M ZnCl2, 10 mM DTT-d10, 0.05% w/v sodium azide94 % H2O, 6 % D2O10 mM6.8ambient298
5HCCH TOSCSY2.3 mM solutions in degassed 10 mM Tris-d11 pH 6.8, 200 M ZnCl2, 10 mM DTT-d10, 0.05% w/v sodium azide94 % H2O, 6 % D2O10 mM6.8ambient298
6HCCH COSY2.3 mM solutions in degassed 10 mM Tris-d11 pH 6.8, 200 M ZnCl2, 10 mM DTT-d10, 0.05% w/v sodium azide94 % H2O, 6 % D2O10 mM6.8ambient298
7HNCO2.3 mM solutions in degassed 10 mM Tris-d11 pH 6.8, 200 M ZnCl2, 10 mM DTT-d10, 0.05% w/v sodium azide94 % H2O, 6 % D2O10 mM6.8ambient298
8HN(CA)CO2.3 mM solutions in degassed 10 mM Tris-d11 pH 6.8, 200 M ZnCl2, 10 mM DTT-d10, 0.05% w/v sodium azide94 % H2O, 6 % D2O10 mM6.8ambient298
9CBCACONH2.3 mM solutions in degassed 10 mM Tris-d11 pH 6.8, 200 M ZnCl2, 10 mM DTT-d10, 0.05% w/v sodium azide94 % H2O, 6 % D2O10 mM6.8ambient298
10HNCACB2.3 mM solutions in degassed 10 mM Tris-d11 pH 6.8, 200 M ZnCl2, 10 mM DTT-d10, 0.05% w/v sodium azide94 % H2O, 6 % D2O10 mM6.8ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2BrukerAMX500
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics and simulated annealingThe calculated structures are based on a total of 1846 NOEs, and include duplicate NOEs. 441 intraresidue, 328 sequential, 157 medium range, 386 long range, 534 ambigous, 5 defined hydrogen bonds from H/D exchange and 29 Phi and 29 Psi constraints and 22 Chi1 constraints.DYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 3D homonuclear techniques, and by Cd113 NMR of a cadmium substituted sample to confirm metal coordinating ligands and coordinating atoms.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionDYANA1.0Guntert
2data analysisSANE1.0Duggan
3structure solutionAmber8.0Case
4processingNMRPipe1.0Delaglio
5data analysisNMRView5.04Johnson
6refinementAmber8.0Case