1T28

High resolution structure of a picornaviral internal cis-acting replication element


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1.4 mM RNA U-15N,13C, 10 mM phosphate buffer (pH 6.8), 10 mM KCl, 0.02 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O6.8ambient298
23D_13C-separated_NOESY1.4 mM RNA U-15N,13C, 10 mM phosphate buffer (pH 6.8), 10 mM KCl, 0.02 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O6.8ambient298
315N, and 13C HSQC1.4 mM RNA U-15N,13C, 10 mM phosphate buffer (pH 6.8), 10 mM KCl, 0.02 mM EDTA, 90% H2O, 10% D2O90% H2O/10% D2O6.8ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITYPLUS600
2VarianUNITYPLUS750
NMR Refinement
MethodDetailsSoftware
distance geometry, molecular dynamics, simulated annealingFelix
NMR Ensemble Information
Conformer Selection Criteriaaveraged structure
Conformers Calculated Total Number18
Conformers Submitted Total Number1
Representative Model1 (minimized average structure)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingFelix2000MSI
2refinementX-PLOR3.1Brunger, A.T., et al.,