1T1H

NMR solution structure of the U box domain from AtPUB14, an armadillo repeat containing protein from Arabidopsis thaliana


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
115N_HSQC, HNCACB,CBCA(CO)NH, HNCO0.9 mM GSPEF-AtPUB14(249-321) U-15N,13C, 20 mM sodium phosphate, 0.15 M NaCl, 1 mM DTT, 10% D2010% D20, 90% H2020 mM sodium phosphate, 0.15M NaCl7.5ambient298
2HN(CA)CO0.6 mM GSPEF-AtPUB14(249-321) U-15N,13C, 20 mM sodium phosphate, 0.15 M NaCl, 1 mM DTT, 10% D2010% D20, 90% H2020 mM sodium phosphate, 0.15M NaCl7.5ambient298
33D_15N-separated TOCSY, 3D_15N-separated NOESY0.6 mM GSPEF-AtPUB14(249-321) U-15N, 20 mM sodium phosphate, 0.15 M NaCl, 1 mM DTT, 10% D2010% D20, 90% H2020 mM sodium phosphate, 0.15M NaCl7.5ambient298
43D_13C-separated TOCSY0.4 mM GSPEF-AtPUB14(249-321) U-15N,13C, 20 mM sodium phosphate, 0.15 M NaCl, 1 mM DTT, 99.96% D2099.96% D20, 0.04% H2O20 mM sodium phosphate, 0.15M NaCl7.5ambient298
53D_13C-separated TOCSY, 3D_13C-separated NOESY0.5 mM GSPEF-AtPUB14(249-321) U-15N,13C, 20 mM sodium phosphate, 0.15 M NaCl, 1 mM DTT, 99.96% D2099.96% D20, 0.04% H2O20 mM sodium phosphate, 0.15M NaCl7.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITY INOVA750
2VarianUNITY INOVA800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealingthe structures are based on a total of 1083 NOE-derived distance constraints and 88 dihedral angle contraintsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with favorable non-bond energy, structures with the least restraint violations
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe
2data analysisPronto20020517
3structure solutionCYANA
4structure solutionX-PLORV3.840
5refinementCNS1.1