1QXN

Solution Structure of the 30 kDa Polysulfide-sulfur Transferase Homodimer from Wolinella Succinogenes


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1mM Sud NA, 50mM sodium phosphate NA, 1mM polysulfide NA, 13mM sulfide NA100% D2Oless than 100mM7.61 atm300
23D_15N-separated_NOESY1mM Sud U-15N, 50mM sodium phosphate NA, 1mM polysulfide NA, 13mM sulfide NA, 95% H2O, 5% D2O95% H2O/5% D2Oless than 100mM7.61 atm300
34D_15N/15N-separated_NOESY1mM Sud U-2H,15N, 50mM sodium phosphate NA, 1mM polysulfide NA, 13mM sulfide NA, 95% H2O, 5% D2O95% H2O/5% D2Oless than 100mM7.61 atm300
43D_CT_CH3_13C-separated_NOESY1mM Sud U-15N,13C, 50mM sodium phosphate NA, 1mM polysulfide NA, 13mM sulfide NA, 95% H2O, 5% D2O95% H2O/5% D2Oless than 100mM7.61 atm300
53D_13C-separated_NOESY1mM Sud U-15N,13C, 50mM sodium phosphate NA, 1mM polysulfide NA, 13mM sulfide NA100% D2Oless than 100mM7.61 atm300
6[15N-1H]-TROSY0.55 mM U-15N, 50mM sodium phosphate NA, 1mM polysulfide NA, 13mM sulfide NA6% w/v C8E5/n-octanol (1:0.87), 90% H2O, 10% D2Oless than 100mM7.61 atm300
73D_15N-separated_NOESY1mM Sud 50% asym. U-2H,15N, 50mM sodium phosphate NA, 1mM polysulfide NA, 13mM sulfide NA, 95% H2O, 5% D2O95% H2O/5% D2Oless than 100mM7.61 atm300
84D_CT_J-resolved_13C-separated_NOESY1mM Sud 50% asym. U-13C, 50mM sodium phosphate NA, 1mM polysulfide NA, 13mM sulfide NA, 95% H2O, 5% D2O95% H2O/5% D2Oless than 100mM7.61 atm300
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX600
2BrukerDMX800
NMR Refinement
MethodDetailsSoftware
Simulated annealing with torsion angle dynamicsThe final structures were refined in explicit solvent (water)XwinNMR
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model8 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingXwinNMR2.6Bruker
2data analysisAURELIA97Bruker
3processingNMRPipe1.6Delaglio
4structure solutionCNS1.1Brunger
5structure solutionARIA1.1Nilges
6refinementARIA1.1Nilges