1Q2I

NMR SOLUTION STRUCTURE OF A PEPTIDE FROM THE MDM-2 BINDING DOMAIN OF THE P53 PROTEIN THAT IS SELECTIVELY CYTOTOXIC TO CANCER CELLS


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY4mM pnc27 in aqueous solution containing 5% DMSO-d6 and 10mM sodium phosphate at pH5.795% H2O, 5% DMSO-d610mM sodium phosphate5.7ambient310
22D TOCSY4mM pnc27 in aqueous solution containing 5% DMSO-d6 and 10mM sodium phosphate at pH5.795% H2O, 5% DMSO-d610mM sodium phosphate5.7ambient310
3DQF-COSY4mM pnc27 in aqueous solution containing 5% DMSO-d6 and 10mM sodium phosphate at pH5.795% H2O, 5% DMSO-d610mM sodium phosphate5.7ambient310
413C-HSQC4mM pnc27 in aqueous solution containing 5% DMSO-d6 and 10mM sodium phosphate at pH5.795% H2O, 5% DMSO-d610mM sodium phosphate5.7ambient310
513C-HSQCTOCSY4mM pnc27 in aqueous solution containing 5% DMSO-d6 and 10mM sodium phosphate at pH5.795% H2O, 5% DMSO-d610mM sodium phosphate5.7ambient310
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealingNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy,target function
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy in their classes)
Additional NMR Experimental Information
DetailsThe assignmnents were determined using 2D homonuclear techniques and confirmed by C13 heteronuclear methods
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2001Delaglio
2data analysisNMRView5.0.4Johnson
3structure solutionDYANA1.5Guentert
4refinementDYANA1.5Guentert