1NHX

PEPCK COMPLEX WITH A GTP-COMPETITIVE INHIBITOR


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.2344.79

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 45.383α = 89.71
b = 61.452β = 70.24
c = 62.265γ = 72.56
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray110IMAGE PLATEMARRESEARCH1999-05-14MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU1.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.12591.30.04123.52.23219932199
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.12.17840.0832

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONRIGID-BODY REFINEMENTTHROUGHOUT2.1503219132191161691.520.175320.173040.21718RANDOM15.816
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.410.03-0.30.62-0.29-0.02
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.095
r_scangle_it2.61
r_scbond_it1.559
r_angle_refined_deg1.131
r_mcangle_it0.991
r_mcbond_it0.519
r_nbd_refined0.187
r_symmetry_vdw_refined0.186
r_symmetry_hbond_refined0.138
r_xyhbond_nbd_refined0.113
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.095
r_scangle_it2.61
r_scbond_it1.559
r_angle_refined_deg1.131
r_mcangle_it0.991
r_mcbond_it0.519
r_nbd_refined0.187
r_symmetry_vdw_refined0.186
r_symmetry_hbond_refined0.138
r_xyhbond_nbd_refined0.113
r_chiral_restr0.077
r_bond_refined_d0.01
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4735
Nucleic Acid Atoms
Solvent Atoms292
Heterogen Atoms54

Software

Software
Software NamePurpose
REFMACrefinement
SCALEPACKdata scaling