1N4N

Structure of the Plant Defensin PhD1 from Petunia Hybrida


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY0.94mM 1H-PhD190% H2O/10% D2O0.94mM3.1ambient310
2DQF-COSY0.94mM 1H-PhD190% H2O/10% D2O0.94mM3.1ambient310
32D NOESY0.94mM 1H-PhD199% D2O, 1% H2O0.94mM3.1ambient310
4E-COSY0.94mM 1H-PhD199% D2O, 1% H2O0.94mM3.1ambient310
52D NOESY0.94mM 1H-PhD190% H2O/10% D2O0.94mM3.1ambient280
6DQF-COSY0.94mM 1H-PhD190% H2O/10% D2O0.94mM3.1ambient280
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX750
NMR Refinement
MethodDetailsSoftware
Torsion angle simulated annealing protocol, incorporated in CNS. Refinement in a box with explicit water molecules using the method of Linge & Nilges (1999)The structures are based on 407 NOE-derived inter-residual distance constraints, 26 phi- and 28 chi1- angle constraints, and 30 distance constraints for 15 hydrogen bonds.XwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model19 (lowest energy)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 2D homonuclear techniques.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.6Bruker
2processingXwinNMR2.6Bruker
3data analysisCCNMRglxccExplorerCieslar & Kalus
4structure solutionX-PLOR3.851Brunger
5structure solutionCNS1.1Brunger
6refinementCNS1.1Brunger