1LMJ

NMR Study of the Fibrillin-1 cbEGF12-13 Pair of Ca2+ Binding Epidermal Growth Factor-like Domains


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY20 mM CaCl2, 4.55 mM Tris, 3.6 mM protein99.9% D2O20 mM CaCl2, 4.55 mM Tris6.5ambient306
23D_15N-separated_NOESY20 mM CaCl2, 4.55 mM Tris, 3.8 mM 15N-protein90% H2O/10% D2O20 mM CaCl2, 4.55 mM Tris6.5ambient306
3HMQC-J20 mM CaCl2, 4.55 mM Tris, 3.8 mM 15N-protein90% H2O/10% D2O20 mM CaCl2, 4.55 mM Tris6.5ambient306
4HSQC (slow HN)20 mM CaCl2, 4.55 mM Tris, 3.8 mM 15N-protein90% H2O/10% D2O20 mM CaCl2, 4.55 mM Tris6.5ambient306
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1GEOMEGA500
2GEOMEGA600
3GEOMEGA750
NMR Refinement
MethodDetailsSoftware
simulated annealing1892 distance constraints including 411 ambiguous constraints, 26 torsion angle phi restraints, 24 restraints for 12 hydrogen bonds RMSD from experimental restraints All 0.013+/-0.001 (1932) Intraresidue 0.009+/-0.002 (504) Sequential 0.011+/-0.002 (388) Short-range (i-j<=4) (211) 0.015+/-0.003 Long-range 0.013+/-0.002 (378) Ambiguous 0.015+/-0.002 (411) H-bonds 0.014+/-0.004 (24) Calcium 0.012+/-0.005 (16) RMSD Phi rest. 0.177+/-0.093 (26)X-PLOR
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry
Conformers Calculated Total Number100
Conformers Submitted Total Number25
Representative Model6 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionX-PLOR3.81Brunger
2refinementX-PLOR3.81Brunger